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Andrew Warren

Andrew Warren's Public Library

27 Feb 14

"Sigma is a JavaScript library dedicated to graph drawing. It makes easy to publish networks on Web pages, and allows developers to integrate network exploration in rich Web applications."

23 Jan 14

"If you need to convert files from one markup format into another, pandoc is your swiss-army "
Pandoc! From a single markdown document, I am writing a manuscript that will also become PDF tutorial and a website.

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21 Dec 13

API query provides simple-to-use REST web services to query/retrieve gene annotation data. It’s designed with simplicity and performance emphasized. A typical use case is to use it to power a web application which requires querying genes and obtaining common gene annotations. For example, services are used to power BioGPS.

02 Dec 13

simulating RNA-seq, here are his slides: and software:

Interesting representation of certain bias

13 Nov 13

site for visualizing phylogeny, tracks, enrichment, expression, etc. through some sort of zoomable interface.

07 Nov 13

parameter equivalents for running different queue systems SLURM sge and torque

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