Andrew Perry's Public Library

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Pexpect is a pure Python module that makes Python a better tool for controlling and automating other programs. Pexpect is similar to the Don Libes `Expect` system, but Pexpect as a different interface that is easier to understand. 

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Tip: to get a discontinuous line where there are missing data points (eg, missing residues in a PDB file), use float('nan') as the value for that point.

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Enrico Malito's site.

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For 3D macromolecular modelling integrating multiple sources of experimental data (x-ray crystallography, NMR spectroscopy, electron microscopy, immuno-electron microscopy, footprinting, chemical cross-linking, FRET spectroscopy, small angle X-ray scattering, immunoprecipitation, genetic interactions).

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Synergy lets you easily share your mouse and keyboard between multiple computers on your desk, and it's Free and Open Source. Just move your mouse off the edge of one computer's screen on to another. You can even share all of your clipboards. All you need is a network connection. Synergy is cross-platform (works on Windows, Mac OS X and Linux).

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Pro-origami is a system for automatically generating protein structure cartoons. The cartoons are intended to make protein structure easy to interpret by laying out the secondary and super-secondary structure in two dimensions in a manner that makes the structure clear.

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ProDy is a free and open-source Python package for analysis and modeling of protein structural dynamics. It allows for efficient analysis of large datasets and is suitable for development or prototyping of structure-based analysis and modeling software.

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The Schemaverse is a space-based strategy game implemented entirely within a PostgreSQL database. Compete against other players using raw SQL commands to command your fleet. Or, if your PL/pgSQL-foo is strong, wield it to write AI and have your fleet command itself!

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A JavaScript library for real-time audio synthesis and composition from within the browser

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An Open-Source, Digital Signal Processing and Sound Synthesis Language, similar to CSound and with Python, Perl, C++ and TCP socket bindings.

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ActionBarSherlock is an extension of the compatibility library designed to facilitate the use of the action bar design pattern across all versions of Android with a single API.

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A Java utility class which facilitates the construction of RESTful API wrappers using the builder pattern.

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