uggestions
1. Don't create too many folders or sub-folders. Search terms will help you find relevant notes.
2. If you know that an item belongs in two different places, use the Replicate method instead of Duplicate. A replicant is not a copy but a twin; revise one, and the other changes.
3. Use the Information window to enter thoughts about the item's relation to various projects. A few simple tags will do (and keep a list of those tags in the database).
4. Keep it simple and don't over-anticipate where the data should go. That way, early ideas of organization won't limit you at the time of writing.
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